YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C85A2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIMMMILGL LVIIVCLCTA LLRWNQMRYS KKGLPPGTMG WPIFGETTEF LKQGPDFMKN  60
   61 QRLRYGSFFK SHILGCPTIV SMDAELNRYI LMNESKGLVA GYPQSMLDIL GTCNIAAVHG 120
  121 PSHRLMRGSL LSLISPTMMK DHLLPKIDDF MRNYLCGWDD LETVDIQEKT KHMAFLSSLL 180
  181 QIAETLKKPE VEEYRTEFFK LVVGTLSVPI DIPGTNYRSG VQARNNIDRL LTELMQERKE 240
  241 SGETFTDMLG YLMKKEDNRY LLTDKEIRDQ VVTILYSGYE TVSTTSMMAL KYLHDHPKAL 300
  301 EELRREHLAI RERKRPDEPL TLDDIKSMKF TRAVIFETSR LATIVNGVLR KTTHDLELNG 360
  361 YLIPKGWRIY VYTREINYDT SLYEDPMIFN PWRWMEKSLE SKSYFLLFGG GVRLCPGKEL 420
  421 GISEVSSFLH YFVTKYRWEE NGEDKLMVFP RVSAPKGYHL KCSPY

Type	Start	End	Confidence
Signal Peptide	1	20	0.75
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	465	0.89