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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLPC2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWSIALLTP PFFGPGRHVQ AKEYREPRGC VMKMSSLKAP VLRIQATEYR EPRGRVKMMS  60
   61 SLQAPLLTIQ SFSGLRAPSA LDYLGRPSPG FLVKYKLAKS SGREKASRCV PKAMFERFTE 120
  121 KAIKVIMLSQ EEARRLGHNF VGTEQILLGL IGEGTGIAAK VLKSMGINLK DSRVEVEKII 180
  181 GRGSGFVAVE IPFTPRAKRV LELSLEEARQ LGHNYIGSEH LLLGLLREGE GVAARVLENL 240
  241 GADPSNIRTQ VIRMVGENNE VTASVGGGSS GNSKMPTLEE YGTNLTKLAE EGKLDPVVGR 300
  301 QPQIERVVQI LARRTKNNPC LIGEPGVGKT AIAEGLAQRI ASGDVPETIE GKTVITLDMG 360
  361 LLVAGTKYRG EFEERLKKLM EEIRQSDEII LFIDEVHTLI GAGAAEGAID AANILKPALA 420
  421 RGELQCIGAT TIDEYRKHIE KDPALERRFQ PVKVPEPTVE EAIQILQGLR ERYEIHHKLR 480
  481 YTDEALVAAA QLSHQYISDR FLPDKAIDLI DEAGSRVRLR HAQLPEEARE LEKQLRQITK 540
  541 EKNEAVRSQD FEMAGSHRDR EIELKAEIAN VLSRGKEVAK AENEAEEGGP TVTESDIQHI 600
  601 VATWTGIPVE KVSSDESSRL LQMEQTLHTR VIGQDEAVKA ISRAIRRARV GLKNPNRPIA 660
  661 SFIFSGPTGV GKSELAKALA AYYFGSEEAM IRLDMSEFME RHTVSKLIGS PPGYVGYTEG 720
  721 GQLTEAVRRR PYTLVLFDEI EKAHPDVFNM MLQILEDGRL TDSKGRTVDF KNTLLIMTSN 780
  781 VGSSVIEKGG RRIGFDLDHD EKDSSYNRIK SLVTEELKQY FRPEFLNRLD EMIVFRQLTK 840
  841 LEVKEIADIM LKEVVARLEV KEIELQVTER FKERVVDEGF DPSYGARPLR RAIMRLLEDS 900
  901 MAEKMLSRDI KEGDSVIVDV DAEGSVVVLS GTTGRVGGFA AEEAMEDPIP IL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle