YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21728107
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFSVVVSSL AAIALATPFF SPNDPTSQLF DRANLISSGC STTGTQSCHN TSSVSNLCCF  60
   61 EAPGGLLLQT QFWDTNPSTG PSDSWTIHGL WPDHCDTTFS ENCDSSRDYT GIGTLLSNNG 120
  121 ASDTLAFMQT HWVDINGQNE QFWEHEWATH GTCMSTLKPS CLPSGSVKGA EAVAFFQTVV 180
  181 KLFQTLPTFT FLSNEGITPS TTKTFTLSQL TTALKAQTGF TPALDCSSGA LNQISWYFNL 240
  241 KGSIIDGTFV PINAPETGSC PSSGIKYPPK SGGSSTTTTG GSSPTGTPGS LPGKATIHAI 300
  301 SSSGTVGGLL SAGTWSTQTL ATYTITGTAS SFTMTSSKGN CGVSGTTFSC GSGVTTTSFS 360
  361 AVTSGSDLLL ASGGSTSFSS DGVPSGSTVF TVFTGTSHTD RYTLSIIST

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	409	0.98