YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49645279
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKSSFSDSS VVASSSSIKS SNKLGKIGMQ EGSNSPRMSA VQNTEARDSS EASFEHEPLL  60
   61 EGQRSGKSSH RTLGAVAPQP INVSNSSSPG DDFSDDDSEL PRDPSDLLYS VRRGYRNFIH 120
  121 KSKTLLNIMI FINTLWLVTT FISDFFFNIN FLRNRITGFQ DLTLIFVSIV ANSLTLWFNK 180
  181 IGYYSSLDQY LNVVLCGLTL FNLLTNLLVK YIRQRIGLLG VCTYLWAAVS FAVSAVMDRY 240
  241 LYYFNTKFHP NNYDDAEADN DENSPHPNEH SHKSIRNRHT LTEWVSIGFR TTVKGVLLVF 300
  301 FILFTLNNVL FSLDSILTTK QVAQVSTEAN AASYDAFHWV DADHNYQIHL KCYGDVFDAE 360
  361 GSEDDRQPIV LFEHGGADTA FLSATWIQEL YHLNRVQRYC VYERPGYGLS DSPPAPVSIS 420
  421 MMADALKHVL LKEANITGPF TTVGYDMGGL FTQVFTAKNI DLVESMLLVE SWHPDLLLKN 480
  481 YISRLLPGDD NDDPDDYSKL PDEINRHNGF VIWWKGILST FNIKLQTSWL LAHHGSKERI 540
  541 YGRDMIYQGK YLRIKFLESV TSSLLSYKDV LNSLENLREI KMSVVSSNEL IKKSPQWGNW 600
  601 QRELSKISSK TQEWKIVDGG HQIYKYGLGK QQAQDVLLRL IGEKDRY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle