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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49645010, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVTTPGNQ SILAEFPYLD QTSHTLINST SLLAQTINVP YQTFRSFVSS IAQRYASVHA  60
   61 HVEQPQVNEN FTTSPDFFWM SVTYFLSGYA ASCLFVAVIL NRLMAMSSLR STNQQLKLAP 120
  121 WAKVTFHMIA LLSLGYALIQ IGAQFRFYGE EQPAGSYMSI CYGIVCLSHC IETFITTTAN 180
  181 LKPLEESDYS LFELSSAFYQ LSKSNATVDS YGYTCIICLL GRFIIHFVEI FNIRHYRIIF 240
  241 STLLNVPFSV YMIYLQFTSN LSGIGSFQVF RVFKNGPKIL STSIVILSYL CYKLSCLVRM 300
  301 GNFGSRFGAT SRVEELQFYS FWQNWTTYLN LSGEEDFYSV ALKFAVFLCN PKQARTNGIH 360
  361 REFEDVTTPT SLHKSYLISG YLNKVDAVPA QELDFRRDLR STSVWRLRIS WYVTMVKYLI 420
  421 GWFKYFWKGN KGRNILEEPE RNFNDFVTEN NYVKFLHVKD EKDTDKFLLP EEDYTEDYVP 480
  481 LETEIEDVDD ELEEYDEDEY DDNFNDVDDD FYSDTEGPIH GAGQERRINN RQLAMAQELF 540
  541 NPEQIQELIR SPNEMSWYLS TWAILNYENV TNERMLTRRR FARNNELGIL REVMSERSPK 600
  601 IHEIHEHHLH DQDSDDEAVD LACVVCKTNT RNIILWPCKC FALCENCRMS LGLRGFNTCI 660
  661 CCRREVSGYS KLNIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle