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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y5371_ARATH
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHSGNGESF HDPLRGFIQR NCFRWNNQKL ILQCFMALAF VGITSSTTQP DIEGGALLQL  60
   61 RDSLNDSSNR LKWTRDFVSP CYSWSYVTCR GQSVVALNLA SSGFTGTLSP AITKLKFLVT 120
  121 LELQNNSLSG ALPDSLGNMV NLQTLNLSVN SFSGSIPASW SQLSNLKHLD LSSNNLTGSI 180
  181 PTQFFSIPTF DFSGTQLICG KSLNQPCSSS SRLPVTSSKK KLRDITLTAS CVASIILFLG 240
  241 AMVMYHHHRV RRTKYDIFFD VAGEDDRKIS FGQLKRFSLR EIQLATDSFN ESNLIGQGGF 300
  301 GKVYRGLLPD KTKVAVKRLA DYFSPGGEAA FQREIQLISV AVHKNLLRLI GFCTTSSERI 360
  361 LVYPYMENLS VAYRLRDLKA GEEGLDWPTR KRVAFGSAHG LEYLHEHCNP KIIHRDLKAA 420
  421 NILLDNNFEP VLGDFGLAKL VDTSLTHVTT QVRGTMGHIA PEYLCTGKSS EKTDVFGYGI 480
  481 TLLELVTGQR AIDFSRLEEE ENILLLDHIK KLLREQRLRD IVDSNLTTYD SKEVETIVQV 540
  541 ALLCTQGSPE DRPAMSEVVK MLQGTGGLAE KWTEWEQLEE VRNKEALLLP TLPATWDEEE 600
  601 TTVDQESIRL STAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle