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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30679055, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVLVTGGV VSGLGKGVTA SSIGVVLKAC GLGVTSIKID PYLNTDAGTM SPFEHGEVFV  60
   61 LDDGGEVDLD LGNYERFLDV TLTKDNNITT GKIYQSVLDK ERKGDYLGKT VQVVPHITDA 120
  121 IKDWIESVSL IPVDGKEGQA DVCVIELGGT VGDIESMPFI EALRQLSFSV GPDNFCLIHV 180
  181 SLIPVLGVVG EQKTKPTQHT VRELRALGLT PHFLACRSAQ PLLESTKAKL SQFCHVAAAN 240
  241 ILNIHDVPNI WHVPLLLRNQ NAHHSILKQL NLTNVATAPD LDSWNKMAET FDNLTNHVQI 300
  301 AMVGKYIGLT DSYLSVVKAL LHACIACSLK PHIEWIAASD LEDESEKSTP EAHAAAWKIL 360
  361 KSAECILVPG GFGDRGVSGM VLAAKYAREN KIPYLGICLG MQIAVIEFAR SVLGLERANS 420
  421 TEFDAQTSDP VVIFMPEGSR THMGSTMRLG SRRTHLHNRD SLTSKLYGQV SYVDERHRHR 480
  481 YEVNPEVAQA LEEAGLRFVG KDDTGKRVEV IEFQDHPFYV GVQFHPEFKS RPTRPSPLFL 540
  541 GFILAARKLL QAHLSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle