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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49640854
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.13
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRHSLSWVT AARSGSRPIL SSTIYRPVVL RRCYSNYFHI KSWKPNVNPK RDVFAFTGGL  60
   61 RHYSESNEKG KESEIQQPAR KHTKQQQPTF RFITERDRLL AQATNILQRL KINLKWTLTR 120
  121 SMRPFNTDDI SAFVSWVLVS NMLLIFLFTT SFLSLAIYLM NTVFAQEYLA TKVGNFLTKN 180
  181 SALSVVFESA IVPDWSSGKI SFNRVFVSRR PKLPHGFSKG SQHEAVERAK LALSERLLVS 240
  241 REDFDDGNYT QFDLTMDQVE ISVSLSKWIN GKGFLDEVTI NGLRGVVDRT HVFWKENDDA 300
  301 RNYLNVHQPG DFEISKFVMN DVLFTLYQPG GFRPFLVSVF NCELPQLRKH WLFFDFLNAD 360
  361 NISGAYDNSM FTIHKKFKQR DTDEESSSSS PWHKVTRMRV DNLNIDHLNA GIEGPFGWIT 420
  421 SGHVDMIGDL LLPENDIDPS QLSEILTVVR DRIVKETRRH SGFIPGNFEE QKDIDVKQYF 480
  481 IMDFLLRLHN VKAEVPLFTP GLSYINNALI RPIVGYINSR RTYIPIRCRV VKNLNDFAGS 540
  541 WTIYDSRLMD DLSAEVYDAF ANYVADDERI NLRMKRVGFW SLQLIIQVIL MSLGAIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle