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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50303289, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQSSLKRA AASTTSTSTV QKAQKEPVQT TTEDQGNEER YAERRPSSSW SVWNAKRETE  60
   61 VGSADQTQRS WWRKPSFASM GLGSKEQNGN ESVQSDDQKS STINRTTSPS SKDNNDATDQ 120
  121 ASNSKTPWLF WNKKDEAKEV LRNKNSILTS NALLPGESYD AILFKAKSEE QTSKETNTLN 180
  181 SNEAHGHNLN LLVPGFQSLP KSSIITSIYA QITKLGILWD TNKSKDSTPN SLYRRNPQIS 240
  241 LNKLSEGKTK PVKVLIVGVH GFFPTKMIRP LIGEPTGTST KFISEAETAV LRWFHKHDTH 300
  301 VEISKIALEK EGKVLDRVAF FFDVLKKWIN EINKADFVYF VAHSQGCPVT IILLAKLIEA 360
  361 GIIDIDNIIT SEDPPISIKS DDKKKIISIL AMAGINNGPF YGADQTFFVK AYSAIESDSL 420
  421 KELFEFQNFY SVLSQKFIQS LRICIASNVK IAFVGSINDQ LVPLYSSTCQ FAHHPNIFKA 480
  481 TFVDKDSRTP AFITRIVSIA NHLINLGYDD HGIIKEISGS LAGTLTGGGH SKIYNEGQVY 540
  541 DLGIQFALET TDLPFELPVV YKSYEVDQLG SNPYHLPWCM RGLLYETGIH LGREEIDALF 600
  601 TEFEQWEPET KQLKNVKYRL NGLKSKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle