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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49640158
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSKGVWGA PPGNNNRQLY SLDAGSSGSG VSASSAQRHS ILDPHDSVMD LLNGQQSCAF  60
   61 DSRLIQNQDL IDRKGKSNNI DHNDINTHTH SKGLTDSWQA IDRDEYSFLN AGNHNNYHNT 120
  121 SNGDFNQQFG GVLSSDTSEE EVEINAAPSP NLSASQQHNQ FLAYPLSSTG FGDQGNSETT 180
  181 VHQFSDGDPV KSTKTGQFSK AELGAGTGED ETIMVNLGHS WAGSFFVMPK LSLSESMKRF 240
  241 KILILSDGDS ANSFYNRLSR YHRLMFDVGK LNEASKEEAL KYTAFMIIFS DSKKVTTILN 300
  301 RMWKKYGDFT LIPICQKGQK QSVTEKVKTF ANSNKIKLMS YPVVISDHYE IHGLLRHLHS 360
  361 LYVEVDSDYE TDIPKKTKPR KGAKKKPAPH LAKRWWFWPI SIALGVGIGC CVTFYFSKFE 420
  421 TSSYNSSVGV IQTADKEIDA IVDAIEGNSP SILEESSPQS ISDFLGQVCK LVKDTAIQIN 480
  481 ELLKQFLSAH LMTSAWIQSI GKEFMQPDSQ STISKVTALD LVMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle