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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49528974
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLRRWVCNA SNASSARLRL PTRVPVWLPD GSPARLAHRA PNQLVPGMSS FQIWSIQVRW  60
   61 ASDKNAVRKS IKEKIAQYKF ITERDRTLAQ TSGLFAKLRI NTRWFLKRSL NRPFNTDDIG 120
  121 AFISWILVSN FIILLLWTTS FVSVIIYLLN TVYAQEYVAE KIGNYLTRNT ALSVVFESAV 180
  181 VPDWSSGKIS FKNVFISRRP KTSHSFTKGS QKEAAQRAKL ALSESLLVNR EDFDHGNYTQ 240
  241 FDLTLDQLDI SLNLRKWING KGFIDEVIIN GLRGIVDRTH VVWKANDDPR NYKNIAQPGD 300
  301 FEISNFKMND VLFTLYQPQG FRPFQVSIFN CELPQLRKHW LFYDILNANS MSGTYDNSMF 360
  361 TIHRKYNTLG DGSSESPVSP WRKVTRFRVD SLDVDHLNAG IEGPFGWITE GKVNMIGDVL 420
  421 LPDKNADSLQ LTELLTEISN RLIKQAKMYN IIPQNKSETP DIDPDDYFIM DFSLKLNHVK 480
  481 ATVPLFAPGM TYINNALIRP IVGYINSHRT YIPIKCRVVK KIDDFEGSWT VYDSYLMQDL 540
  541 SAEVYDAFAV YVADDQQRSQ RIKKVGFWSL QVLLQLILLS LGSIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle