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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50290541, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSPQQRRKN SILSISESIS VSLGLQYPEG NRDGSIDRLN ESNSLNVNAR PNTKNVGIPN  60
   61 NDTNTFLGRS YVSGILGSSL PQGGERNTLP VSNKFGSRAI HEQNKLHRQT AAIAEEFDDG 120
  121 TIGESPSSLK EYLNLLDEAQ EEELDLRNRR DLDNDLITDN KTPVSINLKR ATDPELEQQT 180
  181 VALLTPSSSN NDNYGSVSPE ENFLSATSNY EQESTYQSIT VVPSAGFRQM PTSTTAKAWM 240
  241 TLKRVTNYMP AAILGLLLNI LDALSYGMII FPITEPIFAQ LGPTGISMFY ISTIISQFIY 300
  301 SSGWSSFPSG IGSEMIEITP FYHTMALAIS QALPGRDDEI ITTTIFCYVI SSVITGLTFY 360
  361 LLGKLRLGKI VGFFPRHILI GCIGGVGYFL IITGLEVTTR IAKFEYSIPF LTKLFLDSSM 420
  421 LFKWLLPTIL TIILIVTQKC FKNSLVLPSF YIITLILFHF VVAIAPNLSL HQLRKTGWIF 480
  481 PAPEVSSKWY DHYRYFDIGK AHWSLVVKQI PTMLALTFFG ILHVPINVPA LAMSLQMDKY 540
  541 DVDKELIAHG YSNFFSGLFG SVQNYLVYTN SVLFIRAGAD SAIAGYVLIV LTIMVMVIGP 600
  601 VIISFIPICI VGSLIFLLGY ELLVEAMIDP FGKVTTFEYA TIGIIVLTMG IFDFVLGIVV 660
  661 GILIACFSFL VDSTKLQTVN GEFDGTVAKS TVYRDFTQTR FLSQIGEQIY VLKLQNILFF 720
  721 GTIISIEEKI ERLLEISDND VSKHRIKFLI LDFKNINADN IDYSAAEGFN RIKRYTEAKR 780
  781 IKLIISTIRE SDRIYHVFNQ VGLLQDIELF NDLNSALEWC ENEFLYQYKE LREKARNKLQ 840
  841 RRSKNINAAI GNQLRRYDQT NKNQGPTSSL MQNLMSLSNN TPRNYQLVSA AQQAFSNEQQ 900
  901 ISTEIDTKLK IPDPLLKVLL FALKLYRPNI VSMDTEKRTD EVEFWKQLCP YFTRKVFTAN 960
  961 TTFLHNNNFF FLVDAGILKV IYNLPAGSVY ETLSNGTCYG KILSKRDNEN INQNLRVQVE1020
 1021 TDTILWIIDE KSMEIMKMDN IVLYTELVLL ILAIRDTRFK ELLGYTLVSA 

YRC Informatics Platform - Version 3.0
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