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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49526993
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYRDLTGNH PDDANRDAGS SALSSSSSSI ANEHKQMAND KNLRNPFVTT SEEDVHSTSS  60
   61 SQNLLPHDNN YELAHTPDLI APEHHFTSSS GSNSNPASLN EKMAADYKGY YSKHNKGSPS 120
  121 RFYSANSRKN SSSITPPLNI GNYSDLSSND IRAPPAFDRY PLVGSRLHLS NYRQNFIKND 180
  181 SPPPPFKNEK LADGESSLIV PSSVMFLDDQ DFSPFGGYPA SAFPLSMDEK EDDDFLHNPD 240
  241 PEEEARLDKH RFSEDLKHMN KKSFGGILGV LFLFLGAIAL FIILPVLTYS GAVDHHDNNI 300
  301 HPANSTNFTN HNAVPLSLYQ YPQLSAIRTS LVDPDTPQSA LTRKAKDGSD WRLVFSDEFN 360
  361 AAGRTFYDGD DQFWTAPDIH YDATKDLEWY SPDATTTRNG TLQLRMDAFK NHNLYYRSGM 420
  421 VQSWNKLCFT QGALEISANL PNYGKISGLW PGLWTMGNLG RPGYLASTEG VWPYSYSSCD 480
  481 AGITPNQSSP DGLSYLPGQK LSACTCDGED HPNPGVGRGA PELDILEAEA STELRVGVAS 540
  541 QSLQIAPFDI WYIPDYNFVE IYNFSTTTMN TYCGGPFQQA ISAVTTLNAS WYEFGEGSGK 600
  601 FQKFAIEYLN DKNKGYIRWF VGDNPTFTMY STALHPNGNI DWRYISQEPM SIIMNLGISP 660
  661 NWAYIDWQMI YFPVVMSIDY VRLYQPENAV SLTCDPEDYP TYDYIESHKN AYYNANLTSW 720
  721 KMAGYTFPKN QLTGNCKSSN FKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle