YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50290177, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYKKTLAAS ALATSALAAY VPGKPWSTLT PSATFKGGIT DYASTFGIAV QPIATPASVA  60
   61 KRAVSQIGDG QVQATTKTTS TLAPKAPISQ IGDGQIQATT KTQAAPVSQI GDGQIQATTK 120
  121 TKAAPVSQIG DGQIQATTKT QAAPVSQIGD GQIQATTKTQ AAPVSQIGDG QIQATTKTQA 180
  181 APVSQIGDGQ IQATTKTKAT GVSQIGDGQI QATKTGSTTP SQPPMNNSTI PVPNNNATLP 240
  241 VNAKDPVRAE SCKVDGTLEM NLKGGILTDG KGRIGSIVAN RQFQFDGPPP QAGAIFAAGW 300
  301 SLTPEGNLAI GDNDVFYQCL SGNFYNLYDQ HIGSQCTPVH LSAIDLIKC

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	349	0.99