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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FET3_CANGA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.77
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVPLLLSTY FITAVYGATH TFHWTTGWGN RNVDGIKERP VITCNGEYPW PDVRVAKGDR  60
   61 IEVYLTNGFN NTNTSLHFHG MFQRGTNQMD GVPYLTQCPI GPGDTMLYNF TVDENVGTYW 120
  121 YHSHTDGQYE DGMRGLFVIE DGENNKNFPY EYDEDVMLSI GEWYDTTVDV LTRKFLNLNN 180
  181 PTGAEPIPQN LILNNTMNLT WEVQPDTTYL LRIVNVGGFV SQYFWIEDHE MEVVEVDGVY 240
  241 VEKNTTNMLY ITVAQRYAVL VHTKNDTSKN FAIMQKFDDT MLDVIPKDLQ LNATSYLVYD 300
  301 KSKPMPEQNY VDSIDDYLDD FYLVPMDKEE LYPEADHVIT IDVIMDNLIN GVNYAFFNNI 360
  361 TYTTPKVPTL LTVLSAGQDA LNPFIYGTNT NTFVLKKGEV VDLIVNNQDT GKHPFHLHGH 420
  421 VFQTILRDRE FDDAKGEKPH SFNDSDHAAY PSIPMKRDTV YLNPQSNMVL RFKADNPGVW 480
  481 FFHCHIEWHL LQGLAVVMVE DPISIQNTAS QHLTANGLQV CGNVKVPTQG NAAANDSDFF 540
  541 NLEGQNVQHK SIPTGFTKKG IIAMTFSCLA GVLGITMIAI YGFSEIPEPE IKVMRNLHLN 600
  601 PEDVLEKTSS SSVISASNSS SLEDSRNQKK KFIFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle