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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49525285, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILNPALFLN KCVCIYTTLI LLLLTNGGYA TSSNDISLAS KDPTTFPLGC SPDITTPKKG  60
   61 LSMELYSYDF RKKGSYPCWD AAYLDPNYPR TGYKSHRLLA KVDGVTGNIN FYYHATKGCT 120
  121 PQLGHLPASY NYPKPLTMTN FTMLLYGYFR PKVTGFHTFT ISADDLLFVN FGAGNAFDCC 180
  181 RRDSSADHFG NYQAYAIWGS KTAKDELTVH LDAGVYYPIR LFYNNREYDG ALSFTFKTES 240
  241 NENTVSDFSE YFFSLDDTEE GCPGLISYDS SCASVKTSKI IGIDYHTETP NENLVPITKT 300
  301 IYHLGIPCTG TTTTPLCGSG FYDPLANKCV TINTSSTSSV TKTTSHTTSK EVSFHSSISS 360
  361 QKTLIPKSIP SPYGPIKSQS IPTEMETSSE ISSSEYAFSD VISTPSHSPY TKKHSSLNSS 420
  421 SYTSTVIHSL TSYSISQGIF STSLSEQNIT SKSSTDKFST ATSMSNSITQ SSIIISQSST 480
  481 NNENYTTTSM HTSSDKISTE TLNNSISTTT SILFSNSSTI LKNNTTIISS DKDTHYHPVN 540
  541 PTIVCSTNKT EIICASITQP SISNSNNHWS SSVLRFNSTT VRSTLPSSAG SNETSINVPF 600
  601 SSSTESNAST SSTSTSNSKT VRSTLPSSAG SNETSINVPF SSSTESNTST SSTSTSNSKT 660
  661 VRSTLPSSAG SNETSINVPF SSSTESNAST SSTSTSNSKT VRSTPFSSAG IIMTSLSQRN 720
  721 NKSASSYASS NSKCYNTADS CRKVHSTPSY LLTSSYTSEG VDYDCSLVST KLKINDTNCL 780
  781 NNKHTTKSCL KTSVTTTIPT LEIKTARKSS SNTIGLHSYP TSSPNKSISS APIIGYISSF 840
  841 KTIKTASPSY QTSDLTTITT ITSLNNPGST AVENTHESND KSRKTSSNDI SSKHSVIKET 900
  901 KDAVESSNKS HQTNTLKCSS IIIASSSHNS YESLGGTTLT LTLSKVYSPQ NNDTLPFLEI 960
  961 SEVNPSRTVL PESSKMMQYL TSTEERNKTA RNTIATNIVS ISTFHFEGEG NAIRMGYTQL1020
 1021 LLMLIGIIVM NIGT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle