YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49524565
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYRDTGMDK KGTGTMSKRS PSILVTDART SKNRRSAPFA GHAAGVRSAS SSTGSGSSAS  60
   61 AERGAELMKY VNGNLRGSRG QYAATGGRSS SNHGTGDLSN RGTSSPPRRR ASGRFSEISI 120
  121 DNILSDRSDV PSGRREERGS NSSFDRSMIY DRLHPQPIRK MINTLPIRTS KTSQKLVLIP 180
  181 EDGSVPPTRG ALERREQPTF VKRNPTERIP KSSRDHRLSR ITAYNLAEGF NLKLLSKFLK 240
  241 STHEVKPRLY DECLYIAYTL PLLPGKDGFR LKSNVSKKVV GGKTLIEKLI DTSEQRDHHY 300
  301 EYYSGVETLE DANNNYELDP TSVDNENNNN SNNNPADSFD PSEPQYFAEE TPKEQLERER 360
  361 SESLHINPGS KPIAVNADED QHAEIFVFHY GVIVFWNFTE EEEKNLLGDI AFSDYKNLVI 420
  421 RPLDEQDIEI EQFHFEYDKD TERPRIFNDI ITLRSGDHII ELTLSHAIAQ SSKLSRFESR 480
  481 ISPILTTVTR LPKRLALYGT LGLKREQLIK KSGKLFKLRV DVNLSSSVLD TPEFFWSFEP 540
  541 SLHPLYVAMR EYLEIDQRVQ VLNDRCMVFL EFFDICVDSI AERNIVRVTW WFFVAIVITV 600
  601 IFSLIEVFIR YLIINRLKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle