YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49904307
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLLARPLPSS PFAPPPAHGD RGIGAEYFPS WPCRVLWVQR QLFLVSCRSP PWCGSQVASG  60
   61 DSGAARQVMS ESWEAEEQLA GTSPPGREGE PSGLGWLFAG ELLLNAALVL VVVYGAFRIY 120
  121 LRWKGSGSGG VASLPRMKRR DFTLQQLQEY DGTRNPRILL AVNGKVFDVT QGSKFYGPDG 180
  181 PYGLFAGRDA SRGLATFCLD KEALRDEYDD LSDLNAVQME SVREWEMQFK EKYEYVGRLL 240
  241 KPGEEPSEYT DEEDVRDHTK QD

Type	Start	End	Confidence
Non-Cytoplasmic	1	93	0.67
Transmembrane Helix	94	117	0.77
Cytoplasmic	118	262	0.59