YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148747184, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSSYKRATL DEEDLVDSLS EGDVYPNGLQ VNFRSPRSGQ RCWAARTSVE KRLVVLVTLL  60
   61 AAGLVACLAA LGIQYRTRTP PVCLTEACVS VTSSILNSMD PTVDPCQDFF SYACGGWIKA 120
  121 NPVPDGHSRW GTFSNLWEHN QAIIKHLLEN STASASEAEK KAQVYYRACM NETRIEELRA 180
  181 KPLMELIEKL GGWNITGPWA KDNFQDTLQV VTAHYRTSPF FSVYVSADSK NSNSNVIQVD 240
  241 QSGLGLPSRD YYLNKTENEK VLTGYLNYMV QLGKLLGGGD EDSIRPQMQQ ILDFETALAN 300
  301 ITIPQEKRRD EELIYHKVTA AELQTLAPAI NWLPFLNAIF YPVEINESEP IVVYDKEYLR 360
  361 QVSTLINSTD KCLLNNYMMW NLVRKTSSFL DQRFQDADEK FMEVMYGTKK TCLPRWKFCV 420
  421 SDTENNLGFA LGPMFVKATF AEDSKNIASE IILEIKKAFE ESLSTLKWMD EDTRRSAKEK 480
  481 ADAIYNMIGY PNFIMDPKEL DKVFNDYTAV PDLYFENAMR FFNFSWRVTA DQLRKAPNRD 540
  541 QWSMTPPMVN AYYSPTKNEI VFPAGILQAP FYTRSSPNAL NFGGIGVVVG HELTHAFDDQ 600
  601 GREYDKDGNL RPWWKNSSVE AFKQQTECMV QQYNNYSVNG EPVNGRHTLG ENIADNGGLK 660
  661 AAYRAYQNWV KKNGAEQILP TLGLTSNQLF FLGFAQVWCS VRTPESSHEG LITDPHSPSR 720
  721 FRVIGSLSNS KEFSEHFRCP LGSPMNPRHK CEVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle