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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22137166, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGPVDRFAI PCFEGILSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK  60
   61 KRRKSDVRVS SVSIEDVRDV EELQAVDEFR QALVMEELLP HKHDDYHMML RFLKARKFDI 120
  121 EKAKHMWADM IQWRKEFGTD TIIQDFQFEE IDEVLKYYPH GYHSVDKEGR PVYIERLGKV 180
  181 DPNKLMQVTT LDRYIRYHVK EFERSFMLKF PACTIAAKKY IDSSTTILDV QGVGLKNFTK 240
  241 SARELITRLQ KIDGDNYPET LHQMFIINAG PGFRLLWSTV KSFLDPKTTS KIHVLGCKYQ 300
  301 SKLLEIIDSS ELPEFLGGAC TCADQGGCML SDKGPWKNPE IVKMVLHGGA HRAKHVVKVL 360
  361 NSDGKVIAYA KPSYPWIKGS DTSTAESGSE AEDIVVSPKA VKSYSHLRLT PVREEAKVGS 420
  421 GETSFAGSFA GYDEYVPMVD KAVDATWKVK PTAINRAPSK GAHMPPNVPK DHESFSARVL 480
  481 VTFMAFVMAI LTFFRTVSNR VVTKQLPPPP SQPQIEGSAA AEEADLLNSV LKKLTELEEK 540
  541 IGALQSKPSE MPYEKEELLN AAVCRVDALE AELIATKKAL YKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle