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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANKYVSSVL KSLLVLLHLV FLSKQHVDSA SIVKSLPGFE GQLPFELETG YIGVGEEEEV  60
   61 QLFYYFIKSE RNPKEDPLIL WLTGGPGCSA ISGLLFENGP LTMKLDVYNG TLPSLVSTTY 120
  121 SWTKTSSIIF LDQPVGTGFS YSRTQQFNKP SDSGEAKRIH EFLQKWLGKH QVFSSNPFYV 180
  181 AGDSYSGLVV PATVQEISKG NYECCNPPIN LQGYVLGNPL TDYTTGSNSR IPFAHGMALI 240
  241 SDELYESLKK TCKGEYTNVH PRNTQCLKFV EEFNKCTNRI FQQLILDPLC ETETPDCYIY 300
  301 RYLLTTYWAN DATVREALQI NKESIGEWVR CYYSIPYNND IKSSMPYHVN NSISGYRSLI 360
  361 YSGDHDFEVP YLGTQAWIRS LNYSIIDDWR PWMVKNQIAG YTRTYANKMT FATIKGGGHT 420
  421 AESKPEEASI MFQRWINGQP L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle