YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22330899, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEISDRLNP GITPEFDPKT MRSTKPGLKR LFITSSVLFS FLLGVPFLWK SVEIYRSPLP  60
   61 FHDIDSLSDQ LESTPLRFPC NFHAVFVGFR STDPDNLRSQ IQDGINQLTH QSSQCGSCDF 120
  121 SLSVTVQNRE DQCSDTLAHS STTCSYRCGV IKRNGFSVGL DDTVDESLND VFSGCSENSG 180
  181 KMYSVVVVNK ENANGGDEVK AVVGKRRHAW IVGNGLEERY GDIVARVSEI FVQVFMNGGR 240
  241 EEDSIQGEFM PVGSDGKIVL SFSLLNSNPR DWVYDWDFQR IDEALLAPVT KALAPIANIT 300
  301 VESQVLYHTP KSSFSSWDKK LQSYIFRTSD LPFFVNSNEW HLDTSAGASG RSKILQFVVY 360
  361 IPSGKECPLL LQLPNVEISK TNGFISPMWG GVIVWNPGNC DKDSESPSRN TISLQDLEQI 420
  421 VEIFLGQFRQ LFGFKSEAKY TTGLGTYKIL TSERGFTEWE LDVLSRKHTC FNLHSCSTTL 480
  481 GSLSRLVRSL PRMIIKDEIG EQVKYSLKAA KLAQSNASLG GYSSSASSSR EARSLAENAF 540
  541 FHPSIMSVSY FSYEHCFAVY SPFFLPVVGH VVLAAVREWK RYKQEKAKYL TWLTRKKTT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle