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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|36787200, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKTWKTPLV IISLLVSSHL YAASEPAVEA KNGMVVSSQH LASQVGVDIL KMGGNAVDAA  60
   61 VAVGYAQAVV NPCCGNIGGG GFMTIHLTDG TDTFINFRET APSAASADMY LDKEGNVIKG 120
  121 ASLYGYRAAG VPGTVMGLDS TLKKYGKLSR EQVMAPAIKL AREGFILARA DTDILDTTIK 180
  181 RFRKDPEAAR IFLRKDGSPY QPGDRLIQTD LANTLELIAK KGQDAFYHGN IPKLVAEAAK 240
  241 KSGGIITEAD FANYKISETT PVTCHYRGYK FISSPPPSSG GVTMCEILNI LEGYNLKEMG 300
  301 FNSADYIHTL TEAMRHAYMD RNTYLGDPEF IKNPIDHLLS KHYAESLRKK IEPGKATLSE 360
  361 NIQPGIGPHE KPETTHYSIV DKEGNAVSTT YTINGLFGAV VIAPGTGFFL NDEMDDFTTK 420
  421 IGEKNLYGLI QGATNSIAPG KRPLSSMSPT LVTKDNKTFL VLGSPGGSRI ISITLQTALN 480
  481 IIDHGMSPQE AVNSPRIHHQ WLPDEVYYEQ RGISKDSLNL LEKMGYKMVE QIPWGAAEVI 540
  541 MVGLPKTTST SAKSSGNDAT VSGQVRENHL YGANDVRRPA GAAIGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle