YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PPA7_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMHVCFSVI LMFLSIFFIN GALSKLERLK HPVKKKSDGS LSFLVIGDWG RKGGFNQSLV  60
   61 AHQMGVVGEK LDIDFVISVG DNFYDDGLKG VNDPSFEASF SHIYTHPSLQ KQWYSVLGNH 120
  121 DYRGNVEAQL SKVLTQKDWR WFCRRSFVLS SGMVDFFFAD TNPFVEKYFT EPEDHTYDWR 180
  181 NVLPRNKYIS NLLHDLDLEI KKSRATWKFV VGHHGIKTAG NHGVTQELVD QLLPILEENK 240
  241 VDLYINGHDH CLQHIGSHGK TQFLTSGGGS KAWRGHVQPW DPKELKLYYD GQGFMSLHIT 300
  301 HSKAKFIYYD VSGNVLHRSS LSKRSAHL

Type	Start	End	Confidence
Signal Peptide	1	24	0.95
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	328	0.99