YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33411645
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVNFALSFI FASLALSSPL TSSNPLGLGG QFDVFARNVA ISSGCSTTGT ASCHNTSAVS  60
   61 NTCCFEAPGG LILQTQFWDT DPSTGPSNSW TIHGLWPDNC DGTFSENCDP SRDQSAITSL 120
  121 LESAGATSTL SFMQTYWKND PDDGSDEELW SHEWDTHGTC YSTLEPSCLP SGSPSGTDAV 180
  181 AFYETVVRLF QTLPTYTWLA NQGITPSSST THTLTSLENA LAAEAGVTPM LTCDGSNLNE 240
  241 IAWYFNLKGS IIDGTFVPID SPVDSDCPSS GIKYPLKTGS PVSTTSVSST TTTTTTTGTP 300
  301 TSTGTPGPLP TKAMIVAIHN GAQVGGLLTL GTWSTQTLAT MTLAGSTSSF TMTSSKGSCG 360
  361 VSGGELTCGS GVSATSFTAI SSGGSLLVAS GGSTAFSSSA VPSGETVETV FTGSSEAQTY 420
  421 TLAIVST

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	427	0.97