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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55251324, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPVLPQSVQ APLIWPQRES MEVSLHSTFR LTCRGQAELS WNGPVFIDDQ TNSVKKGLFI  60
   61 STVTISNATA VHTGEYVCSS EPFNSTESTI YIYVPDPQTP FVPSMTPFEN HVLTSYDEME 120
  121 IPCRVTDPSA SVSLIHMETD QVMPSAYDSK RGFIGLFGAG TYVCRALIHG QNHDSIEYIV 180
  181 HGWTGGSDLR VELRAVKRTL LVGETITVDC VAKGSEMLED HWKYPGKLAN RGTKTVKENK 240
  241 LNLEIYYTLT VTNASPKDSG IYACSITDIM SNESQTKELT ITVYDHEFVH INPLIGPVET 300
  301 ARLDEVPEFK VDIESFPAPK VTWLKDSAVL GDDTAEISTN LLKIGETSYK GVLNLIRAKA 360
  361 EDSGNYTVKA EIGSISTSYS FYLQVKVPPV IVDLIDVHHG SAAGQEVVCT AGGSPFPEVD 420
  421 WYICKNLKHC ANDSSQWMPL PINSTDITVE LQMNVDNHIE SHIIFHHLEG TVAVRCLARN 480
  481 DMGVVSREVK LMSSGPHSEL TVAAAVLVLL VIVIISLIVL VIIWKQKPRY EIRWRVIESV 540
  541 SPDGHEYIYV DPMQLPYDSR WEFPRDGLVL GRVLGSGAFG KVVEGTAYGL SRSQPVMKVA 600
  601 VKMLKPTARS SEKQALMSEL KIMTHLGPHL NIVNLLGACT KSGPIYIITE YCFYGDLVNY 660
  661 LHKNRDGFLS RHTEKGKKDL DIFGINPADE SSRSYVILSF EGKGDYMDMK QADTMQYVPM 720
  721 LEMNEASKYS PIQRSDYDHP PSHRQFNDEA ESLLSDDSAE GLTTMDLLSF TYQVARGMEF 780
  781 LASKNCVHRD LAARNVLLSQ GKIVKICDFG LARDIMHDNN YVSKGSTFLP VKWMAPESIF 840
  841 DNLYTTLSDV WSYGILLWEI FSLGGTPYPG MVVDSSFYNK IKSGYRMTKP EHASSDVYEL 900
  901 MMKCWNSEPE KRPSFHSLSD TVASLLPSGF KRCYERVNHD FLKSDHPAVT RVQCIDNDDA 960
  961 YMGVLYKNQG KMKNRESGFD EQRLSSDSGY IIPLPDLDPL SNEDYSKRNR HSSQTSEESA1020
 1021 IDTGSSSSTT KREGETLEDI TLLDEMCLDS GDLVWRNEQD SMSTLEEAQS NGAKTNEEEI1080
 1081 YLSVYRFSVF VRESELCELY F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle