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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21744235
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FCGDKVMAEK NEYIELPWTM NSSSGDDEAP KDPRTGGEDF TQQFTENDFE VTPPAQRVQF  60
   61 ILGEDVDDGT HVSHPLFSEM GMLVKEGDEI EWKETARWIK FEEDVEEGGN RWSKPHVATL 120
  121 SLHSLFELRR LLVNGSVMLD MEAQNLEVMA DLVCDHMVSA GTLPPGVKDK VKDALLRRHR 180
  181 HQHEYAKKTR LPIIRSLADM RNHSSSKKKK SNSKHSRPAQ NLSSITEDMV KSPSNQSMAR 240
  241 PGSGTELSEQ QHKGNTHFMR KIPPGAEASN ILVGEVDFLE RTLSCFIRLS QAVVLGDLTE 300
  301 VPVPTRFVFI LLGPPGSQSN FHEIGRAMAT LMSDEIFHEV AYRARKRDHL LSGVDEFLDA 360
  361 VTVLPPGEWD PTIRIEPPAA IPSQEVRKRP PELPKEEVDE EEEEARLREE NGLSRTGRLF 420
  421 GGLINDIKRK APWYISDYKD ALSMQCVASW IFLYFACLSP IITFGGLLAE ATGKHMAAME 480
  481 SLVSGFVCGM GYGFFSGQPL TILGSTGPVL VFESIIYEFC LKMGWDYMTF RFWIGMWVAG 540
  541 ICIVLTAIDA SALVCYITRF TEENFATLIA FIFIYKAIEN VMVIGKNFPV NQGIYDCVCT 600
  601 PPIGSNASVI DYAKYNWDSC ESYNGTLVGG DCGTPPTENV FLMSVVLCAG TFLISTVLKE 660
  661 FKNALFFPSI VRQYISDFSV LIAIFAMSFF DYSLGVPTQK LEVPNELKPT LSTRGWLIPP 720
  721 FVEKNPWWSA IIAVFPALLG TILIFMDQQI TAVIVNRKEN KLKKGCGYHL DLFILSILIA 780
  781 ICSMMGLPWF VAATVLSINH VNSLKLESEC SAPGEKPQFL GVREQRVTHI LIFLTIGVSV 840
  841 LLTPLLGNIP MPVLFGVFLY MGVASLKGLQ FFDRILIMFM PAKYQPDYMF LRQVPIKRVH 900
  901 LFTMIQLACL IILWLIKSFS QTSILFPLML VVMIGIRKAL DLVFTRRELK ILDDIMPEMT 960
  961 KRAAADDLHK LDAEVGLLAR IFPWGKGSRS RVVTKPPGLD DGIVGSGGAV GAGLITCTTS1020
 1021 NANEKEFEAQ SSLLKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle