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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55251139, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGTKLCLLL LLCAIALSLA KRFKSFQKYE YTYETESLNA LNGAINGPKA RCKVEIEVPR  60
   61 ICSYIVHTTE CELSDVIDVD AEGKPIFMSS AGAEAFKAAM AKNPLKFTVE GDNDIKLFPE 120
  121 NDEPANILNF KRGLISALAA PVLEEDRNRR MPTVYGMCRT DYSVNARQDI ATDVVLNRDL 180
  181 SNCDKFSPVK DHTSPLALIT GMQYPLAQLI RSSQTCNYKF DNDQKHMTSA SCSEKHMLLP 240
  241 FSYKGEHGVS NVGKQALTLV GVSVYNGRIF DHNEANMKTL HLDDSIDSVH PIQDKDAILS 300
  301 ILRDLNDLSE TTNGENRAHL AHKLISTIRK MSAESLSAAL PEALEISRPL VYQALFQCGT 360
  361 PECTSAILRV LRTFDRSSVE IDAAVYAMGM VPNPSRDLVE EMLEMAKFKS SKPIYYALSN 420
  421 AVKRLYEVEK SVTPEIKAVA DYTLEQIGDC TGNQEHVYLS LRVIGNMAAA VGAASPALKS 480
  481 AVIQCINQPA ASPEVQQAAI QVFRLTSVPD EGREVLMKVI FDKAAPIQKR VAAYLIVMKD 540
  541 PQPTELAQLV AALPNNKNCQ AMSFVNSHLR NILSSTTSET GELRVKILNA LQGNEISTST 600
  601 DPTKFSRNYK IGSLEGNVIF ESEELLPNEV ILEMTLNAFG YDVDMFEIGL NGKGLEPTVD 660
  661 ALIGIDGFFR DTMQKTINYA ADKVPRGNDI MQSMFPTLWN NIKMQKAPQS IVKEITNNVN 720
  721 KLIQKLKVQD NPEAMIYLRL LGAEMGYLKT NDVEDMAYSA ALLTKSLLNM FPTDFLRNLY 780
  781 SSVNNNLFLH YVFMDNEFYL PTGTGIPLRV ALSGTFAPGV KGGLKLARDM SEVAFMPSAG 840
  841 VEFVTEVGAL LPEYVESGLE MHTNIYHESG LKVKVAVTNK QFKLTIPTPK TSTKLISVSN 900
  901 SLYSVTGTEI KRIPPLAEHV KARKCTPFIP GFQYCGVMQY SNAFSNDAAP YFPLTGDSKF 960
  961 AIEIHPTGEV SSYTATADYA YDGKDDTVTF GLKAEGITFE SIVKLTFDRQ NYEVSADVQI1020
 1021 PDYDLEAGIR VHAVDRKAQS DATHSIQIDL MKKNVPEASL IGLAKIGSMK DAMLQVQLLI1080
 1081 PNFETDAKVT ATLKNTDELK VELESDIKLP EMTSSIQKMI LKYDAEEIEA EVSSDVTTEI1140
 1141 HNIITTDAIK ATFNDILDQE IGTSDKKIRD VLTQFVEASN AYLEQFSPNI PYVQELRIPA1200
 1201 LPEFTFPKKL FLNAEGAAKY KFGQNYYTIT IPVPLGGKTS RDFNLPAALE TPVLNVPQLD1260
 1261 LQVKSINIPL PVFFIPESLS LSLPLVAKAE VSSKLSSNFY DMEAKASAGS ELVDKPTYSA1320
 1321 MIEVTGTSPV DLLSFKIEGS TFLVGRLGES LKTEMKSSLN HKLLEASVNY FEEITTGEKI1380
 1381 TMKSSSKMEA KSPFGLKISL EHTGQVGLDE DEISGDGNLL GSIKAGPLNG EVALRQSLIL1440
 1441 LPFKPELKID SSLKVDLEQI QAENIIEAAF ANGELSFTSK STAFQDNLIH VAELAYKESQ1500
 1501 LALKSDARAK AFGLNIQNVA EASASFNLVN VKIDTNVDTL FGNRVRSQFI AALDANGLDV1560
 1561 KSDASANLDE HTASHMCSLS LTRNGLVTIG STLLECPDMP LTLQNKFNGA LDTSGLSLSV1620
 1621 ETKGKFVEVT IENTNSLSAS LSSVDFISKA NSDDGTYVHD FSLQLQPYST SLKISNNLNA1680
 1681 LNIKLINEAQ FKALPYAADL TGSWKLSSGT DELKNTYEIK YEDLVATAKC GLTGKLMGSH1740
 1741 MSQNTEIEVA GLSVTYGSES NFNSQYLRFN SDLHAAAVPF RFNVDAMVNA DGDLYLYGKQ1800
 1801 SAQVYSKFLM KAEPLAFAHS HECRVSTTYN LYDDLVFETN LDNKIDTVLT PSEQKATVRV1860
 1861 KSKFNNHEFN KDLSAYNTPE RLGVEMSGSI ITNIFNTVDS DNQDHFFSAF LKYDKNSNSR1920
 1921 ALSLPFIDEF PFDLQHMKLA VLRIVEAMQS YINREEIIVE IQKLATYVSD FVNELNLEEK1980
 1981 IIKFSKDLTA LYEDYGITLD DLEASLMNLK PVLLKLVTEL DTYVVEIEKI VREIITSGTP2040
 2041 SDAAIQRFTD ILNSFNEKYD VKAIVLTVIE AIEKFLREID VMSIKGSREV FKQYVDEYFA2100
 2101 IKSKVEEILS ELKQFVANFD QEKFTEDVKN FVTSARFRDY ADNLVAKIPT EQISKILEKA2160
 2161 KQLLNLLGNR MNAIYTNVRE ILVKSGVDKK IETLLKKVVE LIKKFNIEET VKTLADTLKS2220
 2221 ILTPVTELVD KAINYLKTTE AKEIIEDLNN CLNHCIKYIR SFDYNAFVDE ANQKIKKLTN2280
 2281 DLYTMSLSLE IRQKLEAIRE FVNYALSSMS ACIEKLEKVK VVDVVKKFSD IVDSVVFIDT2340
 2341 EALIEDLRKI LADIDIREEI QKFLKHASSI STKVVTTATD ACSAVMQVIQ NILKDQAVVN2400
 2401 ELKQICDRVK TVLRTAEFKI PSFIFPLTDL VVPSIKISLK NLQEINLPSS LIDLPGFTIL2460
 2461 QYYTVPPIRV EYADIKQGLL DLLHFIANFE IMPAVENIFG DLRIVYMPDI SAITLPEISL2520
 2521 PEISLPEIPK YISKHKFSDL TIPEFTLPGV PTEVMVPCFG KLYGEVRVTI PIFNMRTTVE2580
 2581 FLNSTESAET PQFVGHITSH GSSEYDLLKY TLDSTARVAM PKMSRVILAE TLKITHSVLA2640
 2641 IDHQSSVSLY GLSAQASSKS TMKITSSTYN ANIVNTAFFA LAGGISANIK TTYNDKLNAD2700
 2701 LWNSEYYYGN DIILKQDGLK LLLTMEEEAK GHISVLEKSD DITGKSSSSI IITPTTFSLI2760
 2761 ISVDSSSSVS NIKKSIKADG VALSYVDFTA SIEGTSDSEL FLLNAAGKAD LRQMKVEMKA2820
 2821 DLDTKYAGLL SGTFTSAFNF LVQPFEVVLD FKNKANTKLN LVEPLSAKID LQNNYTVILN2880
 2881 SDEQMLSTGL LARFNQYKYS HNFTLANNED EAGIYAAVNG EANLEFLTIP FSIPAMELET2940
 2941 LTMVIEIPEI SNINLYEQTG LKHVLTDFDQ AIDVDAKMVY QKNDLTSELS FKSSIFNLNA3000
 3001 NAGFYQKDNP VIRFGVITAS EFESLKAKLE GTSSLSTKSG FKLANSLLLE NRHIEGTHES3060
 3061 TATMNLNNFE VTLSMATDAK MNLPILTANA NHQLTADNKA NPKADSTFKM DYNFDVPIIK3120
 3121 LVGKGNAETI LKGEGTRTFI SAETLIKSNI DGTFLDRGIL KGTLNYDESL YVNGNSLRYA3180
 3181 LKTGGNGDLN YGDFKVAFDV DENLSVETAN EHVYATMKFT SNNEANVGSF NTKGVHSSQA3240
 3241 TLDMALLKSL VADMKIDLSQ PSTFGELSIF ETMKVDLSAP KQKIDILSTI KSPVYTTDVR3300
 3301 AKLDGNAPDY KTVLKASATS PVVRLQYDLD SSMSSTMENG ALVVGANAVL THQDFTMDIS3360
 3361 NAIRMSERSH ILNVDITSQT FTDVNLRYAA RSDGISGSVS TPGSGLLGFQ LQGNIPSQMN3420
 3421 ARLYCRYAFA PDDDVDILSV RAVPKGDEKV LLVTGNIKAA QSMFEGLMNT LEKISFKLAG3480
 3481 LAREYGLAFP IFVADDVYGV ISNGLSAARR ATPGVSELSQ LFRNVVVTSQ KTIQVLIDNA3540
 3541 IVLVKEISQY KLPGMNEATL AEICKKIQLV VVEMLRNFGN NLEVYFSPIM DNFNTIQLTF3600
 3601 PNGKVMTVAE FQQNVQSILR SNLVMIADAM KQIESPDVVL KKLGQTLQEV VEKGQEFVDK3660
 3661 MNLSLLEDIA AAINTFYQEL MKIIEDISEA VIFGFSIPAI KIYEISQNIG KVLNANNGIH3720
 3721 QFELPLPFFQ 

YRC Informatics Platform - Version 3.0
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