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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27884149
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLVRRSAAG FGGVVRWGLR CLCSGDAAGR YRNTVLLPRT DFPIKVNGPS LLEQEIKIQQ  60
   61 KCGFDQLYKW QREKKAKKEY CLHDGPPYAN GDPHVGHALN KILKDIRNRF EVLRGRQVHY 120
  121 VPGWDCHGLP IELKALGDLG TNELTPVQIR QKAREFAEKA ISRQRAAFQR WGVMADWDNC 180
  181 YYTFDGKYEA AQLKVFQEMH NKGLIYQDYK PVFWSPSSRT ALAEAELEYN PEHVSRSLYI 240
  241 TFPLLTLPAK LTAKAGLSNV SALIWTTQPW TIPANQAVCY MPKVQYSVVK RADTEQLLLV 300
  301 ATERINSLSS LLKTNLESLV TFAGTDLEGG VCQHPTIPSK EVPLLPASHV TMTKGTGLVH 360
  361 TAPAHGMDDY SVATHFNLPV ECMVDEEGRF TELAGAELQN KSVMDEGNAA VISVLQAAGA 420
  421 VVKEEDCVHS YPYDWRTKQP VVIRASRQWF INTATLKDKA KDALQKVRVI PESARSSLLS 480
  481 MLDRRTYWCI SRQRSWGVPI PVFYHKETGE PLLNKHTVTH IAKVFSEKGS DSWWTEPVET 540
  541 FLTPDVLQKS KASSVSDYVR GEDVLDIWFD SGASWAAVLP ESDPRADSYV EGKDQIGGWF 600
  601 QSSLLTSVAV RNKAPYKALV VHGFAVSEKG EKMSKSIGNV VDPDVVINGG KDSSVSPPYG 660
  661 ADVLRWWVAE SNVFSEVQIG PNALNAAKDS INKLRNTLKF LLGNLQGFDP RSQAVDPKQM 720
  721 HYIDQYMLHL LREFSMKVTD AYSEFNYGLV IRLLQSFTAR ELSNFYFSII KDRLYCDPED 780
  781 SVGRRSCQTV LEEILDGVSR SIAPVLPHLA EEVYLHAPGH DEGNTLFRSG WINTSPVWRK 840
  841 PGLEEAVEGA CAIRDSFLSS IPGRNAAEFD LVISIEPGLF FELMESLQEE PTSTSSQLTE 900
  901 LMMTSRTTLT SALPRDLPSD AITSTGSFLI NLEGGMIREE SSYSIAAMPT ALSRCPRCRR 960
  961 YTSDEPDCLC PRCQTMMEKN GK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle