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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47939028
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWILVSWLAL VARLVAGTQC PDGQFCPVAC CLDQGGANYS CCNPLLDTWP IITSRRLDGS  60
   61 CQIRDHCPDG YSCLLTVSGT SSCCPFSEGV SCDDGQHCCP RGFHCSVDGK SCSQISDSLL 120
  121 GAVQCPGSQF ECPDSATCCI MIDGSWGCCP MPQASCCEDR VHCCPHGASC DLVHTRCISP 180
  181 TGTHPLLKKF PAQRTNRAVA FPFSVVCPDA KTQCPDDSTC CELPTGKYGC CPMPNAICCS 240
  241 DHLHCCPQDT VCDLIQSKCI SKDYTTDLMT KLPGYPVNEV KCDLEVSCPD GYTCCRLNTG 300
  301 AWGCCPFTKA VCCEDHIHCC PAGFQCHTET GTCELGVLQV PWMKKVTASL SLPDPQILKN 360
  361 DVPCDDFSSC PSNNTCCRLS SGDWGCCPIP EAVCCEDRQH CCPAGYTCNV KARTCEKDAG 420
  421 SVQPSMDLTF GSKVGNVECG AGHFCHDNQS CCKDSQGGWA CCPYVKGVCC RDGRHCCPIG 480
  481 FHCSAKGTKC LRKKTPRWDI LLRDPAPRPL L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle