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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21711811
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRKGSGRG KSTVNSRKSA LETAREKAKD EPTANTSQDN KFDNNMENAT TTTAKHYKTA  60
   61 GKQYKTNKVN NTRRATAAAA AAAAAATTTV TTAATPTKKR TYRETATATT VTQRSTNKAN 120
  121 IAAAIALAAA TEATASASAS ATATATDATL TASKAAATAA ATTDAASGNS NSSSKPSTST 180
  181 RDKLGEVPLP TVDSNHIISN NNNNNNNNNT SNNNNNNHHS DNSISENNYE FKSRDKASLS 240
  241 DSKMTLQQMA AVSSNQEPVA PNVANTMSNS SIINSQQTTV NATPATDEAP LGDRSNISRY 300
  301 LHKKFKRLAS TTEVDSWSAT NGGGALQASG DAVRTTSLSS NSSLSPPPTT PLANGHHLMT 360
  361 QQQSHQQVQQ QQQQQTPPPS VAIHEFSANF VNSNHVNAIG HEESIISNSG YKAAGRTRTP 420
  421 LANSNSNTNS TSNSNSNHAA NATLSPASFA QHQQLTQPTT VSPGIPGGAA APNPACEKSG 480
  481 RYVCQYCNLI CAKPSVLEKH IRAHTNERPY PCDTCGIAFK TKSNLYKHCR SRSHAARARG 540
  541 LEVPADADDG LSDQDAELSN SSVVYTNIIT IIITIIIIIL IIIII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle