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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NOXB_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEKKELQQE LELQEFQTPK NQQLEKLQEP NGEISSTGNE TSESGISSPP ISQNDNSNNE  60
   61 NESLNITPNK PFVSMQEELQ NLDIENIPIP PTIQTPKIYK NTNNLIHSKN NLSLPISLSQ 120
  121 ENIVKLDKVD IESNDQVNSN TDNNNNTNNN NNTNNNKNEK IGLRSKIFKS KIFIKIRGWW 180
  181 WHRGISTYIM LFYIALNIGV GVHMFYNMYH SDIFKFLGLS FCFSRTAARL INLNSAVILL 240
  241 PVLRNFLSWL RGTIVNNYIP IDKHLNFHKL CAFMLFCCTI IHCVGHYISF KKINDDVLKI 300
  301 DDGKSVAGDY LNININNFPD EKYLFFKSVP GITGHIMLLI LILIVSSSMW RIRRPMFEIF 360
  361 WYVHHLFIPF YILLCFHGYS KILKKDPQSW MWIIAPFILY SIERLIRIAR SKKRVILEKA 420
  421 IMHPSKVLEL RMKRDNDNFN FKPGQYLYLN CPSIAYHEWH PFTITSAPDD PFISVHINIV 480
  481 GNWTRKLFKL LNPDNKLGLI QEDLKSTQNR GKRRILKIDG PFGAPAENFF KYRNLVLIGA 540
  541 GIGVTPFSSI LRHLKNQNDK QTNADENHLK INKIYFIWIS RQKNSFQWFT DILAELENDE 600
  601 RIDSILEIHI FLTGALELDD YAKIKNAQKC HITNLHSKTL FGRPNFRSIF NQLTQLHQRE 660
  661 KIGVFYCGNK ALGKNIIKNC NKFNGKNNCH LIFHKENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle