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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13509205
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAQWLLGLW LAILLVHRPG AKAYRSGSGY HSEQSEPVGL SATGNAHSSY GGDQQQPIYH  60
   61 RDSACPPHFT GLVAYPHDCH RYVNCFDGSP TIQTCSPGTL FNDRTQVCDH PSNVVCPSAE 120
  121 SASTRLGRLR QLDSEPKCQP GVNGLQPHPS DCSKFLNCAN GQAFIMDCAP GTAFSPASLV 180
  181 CVHKDLAKCG SGTGAVRDDT SGTGYPALPF DDLGCPPGTR GLRPHPHDVH KYLRCGIGVK 240
  241 PQVEQCPRGH IFDGSSSVCV YSDSPRTSSS SFTSAEIQVN YLLCPVGAVG QFVHPFDQTK 300
  301 FLSCKDGKSA VQNCQPNYVF SISRRYCQLK AQLAFTDYVT LIISEISYEY SLILKSCPGN 360
  361 INGIFLYPYD AKKYVQCSSG GRMSILSCGP QMAFSVSQRS CLPSHQVHIS DRVQFWQEVQ 420
  421 VQTTYTSQDL RANVQSQLSS LRSCPPNVQK NYPYPFHAGH YVRCQYGALE IICCPTGQRY 480
  481 SLSHRQCVPR SLLSAHDYLD YSYISAELST EFMVDRSTLS CPPQAQGLYL HPFDCTKYVR 540
  541 CWNQQTFIES CTPGEIFSFS NQKCVPKEQC KGPTDHVEYL IETTTVTTYD SDGPESASSL 600
  601 AKTGDISCPP GASGNHAHPF DCTKFLECSN GETFVKNCGP GTAFSTAKHI CDHANQVDCS 660
  661 GRNSLPEQSQ VTQNNIATSY PTKPLDILPI LKTSPPSYPH AEHLTDLLCP SGVNGQFVHP 720
  721 FDQTKFLLCQ AGKLAVQSCQ SGYVFSISKS ICQPKTQLVY SDYVTYKVSV ISIDQTAKSM 780
  781 ILSACPDGTN GLHLYPYDAG KYVRCSDGGK MSIQSCENQM AFSSSERACR PSRLLSTEDR 840
  841 VRFREELQIQ TTYSSQDIQI QQSPLKECPS VLRGNYPYPF HAGHFVNCQN GHLQIVSCPP 900
  901 TALYSLSQRE CVVRQLLSPH DYLDYAYISV QFSTNIIHDT TALSCPPQAQ GYYLHPFDCT 960
  961 KYIVCWEKQT HIESCPQGEA FSISQQKCVA RDKITQAYDR VEYLEDTQHE LSHEEAEEEE1020
 1021 QTEPESNLSL DGGNQPPGKY QAPYYSNGGY PTPSQNNGGY QTPSQNNGGY QAPFQNNGGY1080
 1081 QPSYQGNGGY TPTYQNPFEG YHQPNQSSYQ TNGGYQPPLP PHGGYQPPSQ TYGGFQQPNR1140
 1141 TYEDFHNPSQ TVGGFQPPYS VKGGYQPHNQ LNGGYNQPNQ SSSFQANGGY QPPSQVNRGY1200
 1201 QTSFESNGGY QPPLETNKGH QVPSQINGGY QPRVDGNRGY QPPNELNGGY QPPNELNGAY1260
 1261 PAPSQLNGGY QPPLEGNLGY RPLSQQNSGY QPPQPSTGGY QPPFQSTGSG HYPGQDAPYA1320
 1321 IPTPLLCPEK VSGLFPNPFD ATGYLTCIDG HTLPRQCQPL DVFSVSQGYC LPEQHVNKTD1380
 1381 RVPFERTQTY QDNSLDCPRD FLGFVVYPFD CSKYLSCGPS GMKLLNCPGE QHYSISHGFC1440
 1441 KPVDQVQRED RLYTINELHI IFEWTQKMMI VGAVTACPEG ITGTLPHPRV PTKYLRCGPG1500
 1501 QAEMYDCPSQ QIFSVSRRVC VLDDKLSSYD RTDYLVRGVN SGWMDPSNDN RQSKSYETSG1560
 1561 RDQFGNRYTT RTTTTTRVIG DRWTDMNMQR PSGVGVEQNP HHHHHGYNPG WSGQETSYVQ1620
 1621 RGPTQSTLYV EGSLQPNHAR ETSRTEQTLD PSTTYASTNF QRSTRRAELD PDTLTATTMK1680
 1681 TNWHAPGHSR DYHRRHPNLP DPFTEHHPNS SPHQHQHHHR HPHEHSADFH LRHPELPNPF1740
 1741 PLKNETPQHQ DLNDDWDLLP NSNAEEVTPK LATRSSFNTQ CDFDCGNGQC LKKEEICDGK1800
 1801 KNCPNGKDEA NCPPSDYEVR LSGGESPNMG RIEVKANGQW GYVCDDKFGL KDADVVCREL1860
 1861 GFQMGAQEVR GSSFYAPPNQ DFNYLMDEVE CHGNETKLGQ CAFKGWGVHN CGVDEVAGVT1920
 1921 CKVPVMKCPN NYWLCHTSKE CIPPAFVCDN TPDCADKSDE CAAVCQAPVQ YRLEGGRNSN1980
 1981 EGRLEVKHHG VWGSVCDDDF NLKSAQVACN SMGFFGPAKI EKNIFGNSNG PIWLDQVMCF2040
 2041 GNETSIDQCN HWNWGEHNCN HTEDVALHCS AGPPPRSQRY SQTQIKGGRS LGRETTPKTY2100
 2101 SQIGLWERSS KAVHTPRRCG IFKDDLTDEY AHREERVVRG NVAQRGRHPW QATIRTRGRG2160
 2161 GISSHWCGAV VISKRHLLTA AHCLYGSPKG AYFVRVGDHY ANIAESSEVD SFIENWYLHE2220
 2221 NFRKGTHMNN DIALVVLKTP LKFSDYVQPI CLPDKNAELV EDRKCTISGW GSIKSGVSTP2280
 2281 AQVLGSAELP ILADHVCKQS NVYGSAMSEG MFCAGSMDES VDACEGDSGG PLVCSDDDGE2340
 2341 TLYGLISWGQ HCGFKNRPGV YVRVNHYIDW IYEKINESLL RF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle