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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21430718
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMLSIYRLL IRRTTTTTAA IATKRRACRR TVKIGRALSR VIPSGGVGTT AQPPKVFHNT  60
   61 RCTRHHKPHH SHGNGSAASA VGGAAGLANG PPMEATQQRE RERERDRDRE RERERDRERD 120
  121 REREREHQLH MHQHNHGLRR KSESVLSTDS DIRFTRRKLG DGQKCGCAVI AGFLIALLVA 180
  181 GIFVYVGYTY FRPEPLPDRV FRGRFMVLND KWSMELANQN SMRFQHKARD YRERINLTLR 240
  241 RSDLREAYEG SEILALDGSE DNNNIVVHFN MIFDPYAGLV SSGDLLALFH EEMTQPPQQR 300
  301 RHFANMTVDV ASLSIKETTG LIEEPIMSSS PLGGHDETTE PVVTTTPAPP RRCSPLELSY 360
  361 CRQVGYNITT YPNLLGHASY EQLAEDVIVF RELVDGECHR EAYDFVCRLL QPPCDTHGSD 420
  421 LQPTPGQICR EYCESFMAGC GGRLPQRFRQ FFDCERFPES TGTQSCHQKP HCVSDMQSNV 480
  481 QSPRLCDGYA DCPDLSDERS CAFCSPNALY CGRGRACVPR KARCDGKADC PDGADEKDCL 540
  541 SIAPLAADLL QPEPLVPYLS RFHSAGYAVF SEKGVVGKLC AEGLEGDAKL VVRQTVSESL 600
  601 CKSLGYESVE IFDVQNDTER LNDYVRVLDP HAPEISFIRT HCPRRQVLYV GCGELRCGVQ 660
  661 SALFNAKQHL SLPKMSAPGD WPWLVALFRE DIHVCDGTLI TQDWVLTTEG CFQGQPRATW 720
  721 MAIVGAVRLS AKAPWTQRRR IIGMIKSPVE GSTAALVRLE TPVSYSDHVR PICLPDALQR 780
  781 RLLQQPPAQR RSHVPVAERL EGQLVSQQRS RLSQENQQFF LIPSQEQQDS STENQGDEDQ 840
  841 DEQEDHFGGE SAASYMPKAE ALHQELDGYP LPDHAPQVNY YSSSSTVTSS STAARIATKA 900
  901 PILAAVPAAQ EQIWTNCNTL GWSRQRDHLQ RVQLKMGDMA PCENVSIATV NSMCMEATYQ 960
  961 KYDCTQEEYS GAPVQCLIPG TNQWALIGVS SWRIACGPTG VERPRMYDKI ASNAAWIRET1020
 1021 ISAI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle