YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21428912
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNPADYTIL SGTQKAQSDP VLQYIHTYLL TGQVARESFI TSIGGVRSSS VLEVKSIDRI  60
   61 RSSRPSQSSM TDEFREEFRN MPVGGINLNS PCCRRTRLDT HKKTQREIGI FCAAFKDSSL 120
  121 EWNYLHQPDF IFKSSMLLAW GIGCCLIYIQ IVTNNFSCTA CIVVDLVTFF FLTSLLCLAW 180
  181 YKNVCWWKSG RYEFRIYGKY SCMAFHIFEK IQHSVSLRIT VYLGILFSYY AVISLIMLNC 240
  241 DRDMYELSYI ESKIYHYEMD RDTCFHPWVF TNMISLILGI SYTFARIPFG LKIVISCCET 300
  301 LAYLLIVFFQ FAFIFQHSAT TTPFMKAELA HCLRVCMMLL TMYAKERQSE FNTKMNYKLN 360
  361 VDLQNKQKAA DLTNQSIIIL LNNILPSHVV DLYLNSLAKH ELYYENYRMV SVMFAMLINF 420
  421 PMNLPSLRVL NDIITQFDRL LTAYREYYVV EKIKVVGCTY MAACGLDFNL ASNIRQTDHF 480
  481 RNSSLHVEVE HARNHRMTDE NYDSDMNNDE VVFIMTTFAL DLMRTLAACN RAYSSSFFER 540
  541 SLSQGKICIG ISSGEIMAGV VGASQPHYDI WGNPVNMASR MESTGLPGHI QVTEESAKIL 600
  601 QEFDIKCIYR GMTFVKGRGD IPTYFVGIDE NLKFMSAKLV NRSLSRRFSV MSSLDPDSLR 660
  661 KSSSSDQESG E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle