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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11037534
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFAVSGAT LGVARPAGAG GGLLPRSGSE RRGGVDLPSL LLRKKDSSRA VLSRAASPGK  60
   61 VLVPDGESDD LASPAQPEEL QIPEDIEEQT AEVNMTGGTA EKLESSEPTQ GIVETITDGV 120
  121 TKGVKELVVG EKPRVVPKPG DGQKIYEIDP TLKDFRSHLD YRYSEYRRIR AAIDQHEGGL 180
  181 EAFSRGYEKL GFTRSAEGIT YREWAPGAHS AALVGDFNNW NPNADTMTRD DYGVWEIFLP 240
  241 NNADGSPAIP HGSRVKIRMD TPSGVKDSIS AWIKFSVQAP GEIPFNGIYY DPPEEEKYVF 300
  301 QHPQPKRPES LRIYESHIGM SSPEPKINSY ANFRDEVLPR IKRLGYNAVQ IMAIQEHSYY 360
  361 ASFGYHVTNF FAPSSRFGTP EDLKSLIDRA HELGLLVLMD IVHSHSSNNT LDGLNGFDGT 420
  421 DTHYFHGGPR GHHWMWDSRL FNYGSWEVLR FLLSNARWWL EEYKFDGFRF DGVTSMMYTH 480
  481 HGLQMTFTGN YGEYFGFATD VDAVVYLMLV NDLIHGLHPD AVSIGEDVSG MPTFCIPVPD 540
  541 GGVGFDYRLH MAVADKWIEL LKQSDESWKM GDIVHTLTNR RWLEKCVTYA ESHDQALVGD 600
  601 KTIAFWLMDK DMYDFMALDR PSTPRIDRGI ALHKMIRLVT MGLGGEGYLN FMGNEFGHPE 660
  661 WIDFPRGPQT LPTGKVLPGN NNSYDKCRRR FDLGDADFLR YHGMQEFDQA MQHLEEKYGF 720
  721 MTSEHQYVSR KHEEDKVIIF ERGDLVFVFN FHWSNSFFDY RVGCSRPGKY KVALDSDDAL 780
  781 FGGFSRLDHD VDYFTTEHPH DNRPRSFSVY TPSRTAVVYA LTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle