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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21392176
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMTLNIGSM KLTKWQLALI LGTPLAIGLG TYAVKSWTAA SKELDGEKKR PKAKIEKQAI  60
   61 SLDGTAPDQE LERNQKSAEL GEKLSPLKEA NNYKTEGNNC YRNGKYDEAI KFYDKAIDKC 120
  121 PKEHRTDMAI FYQNRAASYE MLKKWSNVKE DCTASLEFNP RYAKAYYRRA RAHEATKDMN 180
  181 ECLDDVTATC ILEMFQNNQT IMFADRVLKE TGRLDAEKGM RNRVPVVPSA CFVNTYTRSF 240
  241 IADPLQTMKV PAPKSDAPPK GFLRAHLAFL EEKYEEIIPA CTEEIESSEA EVQYKVEALL 300
  301 MRGTFHLLCG SYVESQQDFD AIIANDYADP NLRAYAYIKR AALYIQLDQR EKGIADFAEA 360
  361 ERLNPENPDV YHQRAQILLL LEQIEPALAE FEKAVSIAPN HAIAFVQKCY AEYRLSLLAG 420
  421 DQRRLESVMH TFQNAIERFP SCVECYSLTA QVLADQQQFT QAEEYYKKAM VLAPTNPALI 480
  481 VHQAIMVLQW RGDINLAVQL LNKAIEVDPK CELAYETLGT VEVQRAQLTR AVELFEKALL 540
  541 YAKSQAELVH VYSLRNAAVA QINVTKKLGI DMNSVSAMAQ SGLMAQGVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle