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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|158937165
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRFNLCAAG VALALSGAAV AAPTAPSVDM YGSNNLQFSK IELAMETTSG YYDMVKYHDQ  60
   61 AKITVKFNQW SGTPGDTYNI YFDGVKVATG AITGGQTTAT FDYGQGGLYQ MEIEACDATG 120
  121 CSKSAPAEIT IADTDGSHLK PLTMNVDPNN KTYNTDPSVV MGTYFVEWGI YGRNYTVDNM 180
  181 PADNLTHILY GFIPICGPNE SVKSVGGNSF NALQTACRGV PDYEVVIHDP WAAYQKSFPQ 240
  241 AGHEYSTPIK GNYAMLMALK QRNPDLKIIP SIGGWTLSDP FYDFVNKANR DTFVASVKKF 300
  301 LKTWKFYDGV DIDWEFPGGG GAAADKGDPV NDGPAYVALM RELRAMLDEL EAETGRTYEL 360
  361 TSAIGVGYDK IEDVNYADAV QYMDYIFAMT YDFYGGWNNV PGHQTALYCG SFMRPGQCDG 420
  421 SGVDENGEAY KGPAYTADNG IQLLLAQGVP ANKLVLGTAM YGRGWEGVTP DTLTDPNDPM 480
  481 TGTATGKLKG STAQGVWEDG VIDYKGIKSF MLGANNTGIN GFEYGYDAQA EAPWVWNRTT 540
  541 GELITFDDHR SVLAKGSYAK SLGLAGLFSW EIDADNGDIL NAMHEGMAGG VVPQPNRKPT 600
  601 AAAGADQSVT GPASVVLDGS LSKDSDGTIA SYAWEQVSGT AVVLAGANTA KASFDAAEVT 660
  661 VEEQLTFKLT VTDNEGATAS DLVVVTVKPA GVVDPVNNAP VAQVVAPATA NAGDVVVVDA 720
  721 SASSDADNDT LTFNWTLPQG LNATVNGSKV TFTAAEYPQD TSLSFTVSVS DGKASSSASA 780
  781 TVVVAQHTTD PNPGTCDNAW DASAVYTGGN QVTHAGKTWE AKWWTQGDDP SKSGEWGVWK 840
  841 EVGVANCN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle