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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLCB_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNNYKAGTA INGNDYLLLN IDGNKDCDTD NGFFSGKNFF GGNQTSITHR RHHKMTTKTD  60
   61 RELMSHFESL DFNAIDNIIH RKYTFEKKKY QKILKTLGKW VICTLIGVVV GLVCYCLKES 120
  121 VDQLQSLKLT QVKKFYSTES TIFIPFLVYL GFNLCYGLIS GLLVCIFGPM SSSSGLPEVK 180
  181 GYLNGIRISK AFNLKTVLGK LVSLIFSFSS GLVLGPEGPM FHIGAGIGSS MSQFKSKTLK 240
  241 FHLKSFWIFQ NDSDKRDFIS CGAAAGIAAA FGAPIGGVLF CLEEGSSFWS RQLTWRTFFS 300
  301 CLIATMTANL FLQGFTQQIH DYGVLTFGVS KSYLYTYTEL IPFMIMGIIG GLLGAIFVHV 360
  361 NVRVNHWRKK LFANKSKLYK MIEVCVIVIL SSVVCFFPAL LADCRPISGI SGLTPGTCDP 420
  421 GDDSTLILNQ FNCAEGYYNP MATLTLTTLE NSLQIVFSRS TNIFTAQTLL TFSIFYYVLT 480
  481 IITSGLYVAS GIFIPMMLIG SSWGRLIGIF LSKYFTSIDP SIYALIGAAS MMAGSLRMTI 540
  541 SLVVIIVELT ETTQYLLPVI LSVMVGKWCG DIFNESIYEH LIELKHIPYL NSQPPNHLRK 600
  601 KTVAEAMSTD VKTLPEIVKV KTALTILETC PHNGFPVVML PQLHSNSNLN DSNQLSLSLN 660
  661 LNNNNNNNNN NNNNNNNNNN NNNNNNNNNI LCGLILRSQL SVLLRRKIFN SPEDLKNIDF 720
  721 ISDKGYNLPI DHTEFSQELA SKIPPIHELS KLITKEDLDM YIDLRPYMNF AVVSIKNYSS 780
  781 LSEAYQIFRQ VGLRHMVVIN VFNNVVGMLT RKDLC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle