YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DHKC_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVEVELGFL LSTLFFTIIS IILFYFFINN KNNLIDQCQE VTKLNNKDNK IVNNNNNNYN  60
   61 NNNFNKIEEI NDDKNKEIIK LINNSNNKNL KIKIQEIDSG NNNNNNNNNN NNNNNNLNKN 120
  121 SNEIFRNFKI FSGSLLVIDQ DLNIISSSES VRDIFSNIND INGVNQQVIG SLQNYSFINL 180
  181 VHQKDKDRVS TFLKLKFKNN NNIKHQQFSE DIINEKDELK EIQIEDNKEL IIINNNNNNN 240
  241 NDNVLKFGNN NSNNSSIILF QGVYHLNNTD LSKPFNLQVS ILPFISENYI VLSLKDLSPP 300
  301 PLRLLLNKTS SALSPRSLSS SSSSSPSSSN NNGNTNNSGS LSPRSSNSNG SAVSPRNVSS 360
  361 NSMSPRGQNS DRSISSPRGS SSSSSSSSNE LAISPRNSNG TISSPRTSNL SIESVLNNKS 420
  421 IDMISHLSHE LRTPIHSVIA SIQLFRSTIL TVTQNEYLSI IDTSANTLLE LVSNVLDYKR 480
  481 IRSGKLTLNN VDFNLCHVIE DVCAMVSPQA QAKSLQIASF IFIHCPLSFY GDPIRLRQVL 540
  541 LNLIGNGLKY TNKGQVCISV EPEQVNEHCM YLHFQVKDSG IGIKEENMSK LFAGFSQVNN 600
  601 GGTTQEALGS GLGLAISKDL VELMGGKIWC SSNATQNNGE AGCTFHFVIP LETNPKQLPC 660
  661 PIQNFNGLSV LVVDKNPYIQ TVLCQYLEGW NCQVIKSSDI KEASNKLKDL RREQIEVVMI 720
  721 DIDNIDFRDF IQFKDAFNRL EFGRIGLITM SSDRSMVNEM GFGTSKLTKP FRQSHLVACL 780
  781 LASMPEHSSS TTNCFSNIVG MNSNINNNNN INNNSNNNNN NMQTHNSNSV YGNGNYGNCT 840
  841 PFSNNNNRIH MMSSGDKPSI NNRRMSISLG KIPTFNSGGS NSPRSKKLFE EVLQQQQLQQ 900
  901 QLQQQLQQQQ QLQQQQQQQQ QQQQQQQQQL QQQQQQLNTI DDDSNNYCNT TGTMDSIDEI 960
  961 NKNNYSDSES DELNDDQAPI IAPVQQLSFG RVTRRHSIDI IMFENSRELS ELRNLEDSTR1020
 1021 YLSPRSMNNN NGNNDNGING GSGNSLFGSS IKEEIGGTSD TSSLAQSPNS LSPRAPTKIM1080
 1081 ILDDNPVSLK LMQRILESRG FECYPFDCSE KAVAQLDQVN PAIIFMDCEM PKMNGFECTQ1140
 1141 LIRKREQESL CLLKDRKIII ALTAHINPEI QVKCFDAGMN DFISKPFKPQ CLELILRKWE1200
 1201 DCISNNQLNY NNSLINNQTT IQEQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle