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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18424704, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLFKFIFLL SLLWSFYSLG SSQLQASQAQ VLLQLKKHLE YPQQLESWYD HRTNFCYLQA  60
   61 TPSMNITCFS NSVSELNIFG DKSSEKAKSF DGFAISNVTL SDGFSIESFV TTLSRLKSLR 120
  121 VLTLASLGIW GRLPEKLHRL SSLEYLDLSN NFLFGSVPPK LSTMVKLETF RFDHNFFNGT 180
  181 LPSWFDSYWY LKVLSFKSNK LSGELHSSLL SLSTIEYIDL RANSLSGSLP DDLKCGSKLW 240
  241 FIDISDNKLT GKLPRCLSSK QDIALRFNGN CLSLEKQQHP ESFCVKEVRA AAKAEAKAEA 300
  301 EAANESGKRK WKKGALIGLI VGISMSVLVL VCCVFILLRR KGVTKKHVHH NTVQDNHPTT 360
  361 GFSSEILSNA RYISETSKFG SEDLPVCRQF SLEEIVKATK NFDKTMILGE SSLYGTLYKG 420
  421 NLENGTKVAI RCLPSSKKYS IRNLKLRLDL LAKLRHPNLV CLLGHCIDCG GKDDYSVEKV 480
  481 FLIYEYIPNG NFQSCLSDNS SGKGMNWSER LNVLTGVAKA VHFLHTGVIP GFFSNRLKTN 540
  541 NVLLNQHRFA KLSDYGLSIV SEATRHNTEI AKSWQMSRLE DDVYSFGLIL LQSIVGPSVS 600
  601 AREEAFLRDE LASLESEEGR RRMVNPTVQA TCRNGSLIRV ITLMNKCVSP ESLSRPSFED 660
  661 ILWNLQYASQ LQAASDGDQC 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle