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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7445894, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGCAPSRVA SCGPWGGRAA LESELSWDGS HYSISSGILP SLGARSNRRV KLRPFIVSPY  60
   61 ADRYRCWETF LIILVVYSAW VSPFEFGFIQ KPTGALAAVD NVVNAFFAVD IILTFFVAYL 120
  121 DRMTYLLEDD PKRIAWRYTT SWFVLDVAST IPSEFARKIL PPDLRSYGFF NMLRLWRLRR 180
  181 VSSLFARLEK DRHFNYFWVR CAKLICVTLF AVHCSACFYY LLADMYPTPT DTWIGNSMPD 240
  241 FHQRGLWIRY VVSVYWSITT LTTVGYGDLH AENTREMIFN ILYMLFNLGL TAYLIGNMTN 300
  301 LVVHGTSRTR KYRDTIQAAT SFALRNQLPS RLQDQMMSHL CLKFRTDSEG LQQQETLDVL 360
  361 PKAIRSSISQ YLFFNLVQKV YLFEGVSNDL IFQLVSEMKA EYFPPREDVI LQNEAPTDFY 420
  421 ILVIGSAELI ELQNGGEQMV GVAKAGDVVG EIGVLCYRPQ LFTVRTKSLC QLLRMNRTAF 480
  481 LSLVQSNVAD GTIIMNNLIR LLKQQNDNSV MMGVLKEYEN MLARGRLDLP VTLCFAVNKG 540
  541 DDFMLHQLLK RGLDPNESDN NGHTALHIAA SKGDEQCVKL LLEHGADPNA RDSEGKVPLW 600
  601 EALCEKQNPV VELLVQSGAG LSSGDVALYS CVAVEENDPE LLENIIRYGG NVNSSMKDGT 660
  661 TPLHRAVCDG NVQMVELLLE HGADIDKQDN NGWSARALAD QQGHDDIHSL SRSRKAHRQQ 720
  721 HASKGTVAPV PIWRFNSEPT MPNIKHEEDA ELRGKVVPQK LLRKRVSFQN SLFGVISSSH 780
  781 ARQDTGRLLS KGLAGPGSPG CSHGSLVRVT IGCPEKGNAA GKLVLLPRSM TEVLELGARK 840
  841 FGFKPTKVLT TGGAEIDEVE LIRDGDHVVL VSDDWAPDVA QLRPNDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle