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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125971776, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNSENHHPH HQHHHSDTEI IGNDRASYSG PLSGPLNKRG GKKSARFNIP ESTDIGTSVG  60
   61 TGGKSNDDAY VEITLDVRED SVAVHSVKTA GGDDVEDPEL ALLAKGLEKK STLGSSLVRN 120
  121 ASSRIRQVSQ ELRRLASLNK RPIPTGRFDR NKSAAAHALK GLKFISKTDG GAGWAAVEKR 180
  181 FDEITASTTG LLPRAKFGEC IGMNKESKEF AVELYDALAR RRNITTDSIN KAQLKEFWDQ 240
  241 VADQSFDSRL QTFFDMVDKD ADGRITEEEV REIIGLSASA NRLSTIQKQA DEYAAMIMEE 300
  301 LDPNNLGYIM IENLEMLLLQ APNQSVQRGG ESRNLSQMLS QKLKHTQERN PIVRWYKSFM 360
  361 YFLLDNWQRV WVLLLWIGIM AGLFTWKYIQ YKEKAAYKVM GPCVCFAKGA AETLKLNMAI 420
  421 ILFPVCRNTI TWLRNKTRLG AAVPFDDNLN FHKVIAVAIA LGVGIHGLSH LTCDFPRLLN 480
  481 ASEEEYEPMK YYFGDQPESY WWFIKGVEGV TGIIMVVLMA IAFTLATPWF RRNRVSLPKP 540
  541 FHKLTGFNAF WYSHHLFVIV YTLFIVHGEK LYITKDWYKR TTWMYLTIPI ILYASERLIR 600
  601 AFRSSIKAVK ILKVAVYPGN VLALHMSKPQ GYKYKSGQYM FVNCAAVSPF EWHPFSITSA 660
  661 PGDDYLSVHI RTLGDWTRQL KTVFSEVCQP PPNGKSGLLR ADYLQGENNP NFPRVLIDGP 720
  721 YGAPAQDYKK YEVVLLVGLG IGATPMISIV KDIVNNMKAM DEEENSLEDG HNNNMAPNSS 780
  781 PNIAKNKGNK SGSASGGNNF NTRRAYFYWV TREQGSFDWF KGIMNEAAEM DHKGVIEMHN 840
  841 YCTSVYEEGD ARSALITMLQ SLHHAKNGVD IVSGTRVKSH FAKPNWRNVY KRIALNHPEA 900
  901 KVGVFYCGAP ALTKELRQHA LDFSHKTSTK FDFHKENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle