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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ppk28-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLTESRRR QSGSSGCKKD SESDDDENTI CSRAAIKRSV VYYLKNSTLH GLKYIAEESI  60
   61 TIPERIFFGL AFVLVVILSV FFISNVYVKW SASPIIISTS AKQKLTSNMP FPAITICNLN 120
  121 QALLSKVDRI GRTSTNFSLL MGLCDQGGDT TISYIGTWKY FKAILVDVAQ PCEKMLLYCS 180
  181 FGSREEDCSW LFTSILTDDG LCCNFNALHP SYLIRNYSDD VRLETAHPNT RYELIDWTPE 240
  241 KGYARNLPEF YFPRTSGGTG IRMGLTVVLN ASIAEYYCTK SMSVGFKVLV HNPAELPKVS 300
  301 NYGFVVTAGR EARIPIEPVY EDALPTIRSI KKSVRRCLFS DENDLAYYRT YSRKNCELEC 360
  361 EAKLLLRECS CVLYYLPRID PLARVCGPND NQCTDRVQTE IESSLTNLSC ENCWPGCFEL 420
  421 TYRATLSTAS IVSDPRFQAG ENLPEYIFHG PYSNASEISI LHFYYMTNIF RSTTKSEMFG 480
  481 FTEFLSNTGG LLGLFMGFSI FSVIEIFFYI TVRPYCASRT LRQRHKRRLE QLSWLTPIRM 540
  541 PVRRALRRNR GGLLRNPPPP AYSDLQKFRG KLDKPETCKR KLWRTLQVRP VVDRADEELP 600
  601 TYPYLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle