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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ppk28-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLTESRRR QSGSSGCKKD SESDDDENTI CSRAAIKRSV VYYLKNSTLH GLKYIAEESI  60
   61 TIPERYVSKV AESISLSQRS RTNSYFISPF SIFFGLAFVL VVILSVFFIS NVYVKWSASP 120
  121 IIISTSAKQK LTSNMPFPAI TICNLNQALL SKVDRIGRTS TNFSLLMGLC DQGGDTTISY 180
  181 IGTWKYFKAI LVDVAQPCEK MLLYCSFGSR EEDCSWLFTS ILTDDGLCCN FNALHPSYLI 240
  241 RNYSDDVRLE TAHPNTRYEL IDWTPEKGYA RNLPEFYFPR TSGGTGIRMG LTVVLNASIA 300
  301 EYYCTKSMSV GFKVLVHNPA ELPKVSNYGF VVTAGREARI PIEPVYEDAL PTIRSIKKSV 360
  361 RRCLFSDEND LAYYRTYSRK NCELECEAKL LLRECSCVLY YLPRIDPLAR VCGPNDNQCT 420
  421 DRVQTEIESS LTNLSCENCW PGCFELTYRA TLSTASIVSD PRFQAGENLP EYIFHGPYSN 480
  481 ASEISILHFY YMTNIFRSTT KSEMFGFTEF LSNTGGLLGL FMGFSIFSVI EIFFYITVRP 540
  541 YCASRTLRQR HKRRLEQLSW LTPIRMPVRR ALRRNRGGLL RNPPPPAYSD LQKFRGKLDK 600
  601 PETCKRKLWR TLQVRPVVDR ADEELPTYPY LD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle