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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6759597
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGDKAISLE EIKNESVDLE RIPIEEVFEQ LKCTREGLTG DEGANRLQVF GPNKLEEKKE  60
   61 SKLLKFLGFM WNPLSWVMEA AAVMAIALAN GGGRPPDWQD FVGIVVLLVI NSTISFIEEN 120
  121 NAGNAAAALM AGLAPKTKVL RDGRWTEQEA SILVPGDIIS IKLGDIVPAD ARLLEGDPLK 180
  181 IDQSALTGES LPVTKNPSEE VFSGSTCKQG EIEAVVIATG VHTFFGKAAH LVDSTNQVGH 240
  241 FQKVLTAIGN FCICSIAVGI LIELIVMYPI QKRKYRDGID NLLVLLIGGI PIAMPTVLSV 300
  301 TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLSVDRNL IEVFAKGVEK 360
  361 EHVMLLAARA SRTENQDAID AAIVGMLADP KEARVGIREV HFLPFNPVDK RTALTYIDSD 420
  421 GNWHRASKGA PEQILALCNC KEDFKKRVHA VIDKFAERGL RSLAVARQQV PEKTKESPGT 480
  481 PWQFVGLLPL FDPPRHDSAE TIRRALNLGV NVKMITGDQL AIGKETGRRL GMGTNMYPSS 540
  541 ALLGQDKDAS IASLPVDELI EKADGFAGVF PEHKYEIVKR LQERKHICGM TGDGVNDAPA 600
  601 LKKADIGIAV ADATDAARGA SDIVLTEPGL SVIISAVLTS RAIFQRMKNY TIYAVSITIR 660
  661 IVFGFMFIAL IWKFDFAPFM VLIIAILNDG TIMTISKDRV KPSPQPDSWK LKEIFATGIV 720
  721 LGGYMALMTV VFFWLMKDTK FFSNTFNVRH LGDRPEQMMA ALYLQVSIVS QALIFVTRSR 780
  781 SWSFVERPGL LLLGAFMVAQ LVATLIAVYA NWAFARIEGC GWGWAGVIWL FSVVTYFPLD 840
  841 LLKFAIRYIL SGKAWDNLLE NKTAFTTKKD YGKEEREAQW AAAQRTLHGL QPPETNNLFS 900
  901 EKNSYRELSE IAEQAKRRAE VARLRELHTL KGHVESVVKL KGLDIDTIQQ HYTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle