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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7435656, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGMLLKCMF FFVSVCLAIN LAKCSPNTKK TYIIQMDKWA KPDVFVDHVQ WYSSLVKSVL  60
   61 PSTTEVEKTG DGEERILYSY QTAFHGVAAQ LSEEEVKKLQ ERNGVLAVFP EIKYQLHTTR 120
  121 SPLFLGLDRE DSSKLWADRL SDHNVIVGVL DTGIWPESPS FNDSGMTSVP SHWKGVCETG 180
  181 RGFEKHHCSK KIVGARVFFR GYEAASGKIN ERGEFKSARD QDGHGTHTAG TVAGSVVRGA 240
  241 NLLGYAYGTA RGMAPGARVA AYKVCWVGGC FSSDILSAVD QAVADGVNIL SISLGGGVSS 300
  301 YNRDSLSIAA FGAMEKGVFV SCSAGNGGPD PISLTNVSPW ITTVGASTMD RDFPATVELG 360
  361 TGKIVTGASL YKGRMNLSTQ KQYPLIYLGS NSSNLMPSSL CLDGTLDKAS VAGKIVICDR 420
  421 GISPRVQKGQ VVKEAGGVGM ILTNTAANGE ELVADSHLLP AVAVGEREGR AIKLYAAGRS 480
  481 ATATLRFLGT KLGIRPSPVV AAFSSRGPNF LSLEILKPDM VAPGVNILAG WTGALGPSSL 540
  541 PIDQRRTNFN ILSGTSMSCP HVSGIAALLK ARHPDWSPAA IKSALMTTAY VHDNTYKSLK 600
  601 DASSVTPSTP YDHGAGHVNP RKAVDPGLIY DIGAQDYFEF LCTQELSPSQ LMVFGKFSNR 660
  661 TCHHSLANPG DLNYPAISAV FPEKTKLSML TLHRTVTNVG SPISNYHVVV SAFKGAVVKV 720
  721 EPERLNFTSK NQKLSYKVTF KTVSRQKAPE FGSLIWKDGT HKVRSPIAIT WLASV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle