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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15220954, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA  60
   61 SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV LCAKKLKLHL RLRSGGHDYE 120
  121 GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL 180
  181 CTSLGIGGHI IGGAYGSMMR KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG 240
  241 GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT 300
  301 SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP 360
  361 STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE KLLEEDSPLT IWNPYGGMMA 420
  421 KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN 480
  481 YRDLDLGMNG KGSDAREWGN RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle