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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15131529
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEACNCIEPQ WPADELLIKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFNMHS RTVAIVMTTA KVLTAVVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA 180
  181 LWMPTRTALE LQLSYTLRQQ NPVGHTVPIH LPVINQVFSS NRAVKISPNS PVARLRPLVG 240
  241 KHMPGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PCDSARQWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESRRAR DLLMEQNIAL DLARREAETA IRARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLQ ETELTPEQRL MVETILKSSN LLATLINDVL DLSRLEDGSL QLDIATFNLH 420
  421 SVFIEVHNLV KPVASVKKLS VTLNLAADLP VYAIGDERRL LQIILNVVGN AVKFSKEGSI 480
  481 SITAFVAKSE SLRDFRAADF FPVQSDNHFY LRVQVKDSGS GINPQDLPKL FTKFAQNQSL 540
  541 ATRNSGGSGL GLAICKRFVN LMEGHIWIES DGLGKGCTTT FIVKLGYPER SNESKLPFVP 600
  601 KMHTTHVQTN FPGLKVLVMD DNGVSRSVTK GLLEHLGCDV TTVSSSDEFL QVISQEHKVV 660
  661 FMDVCMPGID GFELAVQIHE KFTKRHERPV LVALTGNINK MTKESCMRVG MEGVILKPVS 720
  721 VDKMRSVLSE LLEHRVLFEA M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle