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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28393583
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACPRVIFLI LITFFILQTA FSSSWQTLSG KPPAVIARGG FSGMFPDSSI QAYQLVNITT  60
   61 SPDVMLWCDL QLTKDGVGIC FPNLKLDNGS NVIRIDPHYK ERFSVDFTWK ELSDVKLAQG 120
  121 VVSRPYIFDD VSSILAIEEV AKLTASGLWL NIQDSAFYAK HNLSMRNSVV SLSRRLKVNF 180
  181 ISSPGISFLK SMKNSVKPTV TKLIFRFLKQ EHIEPFTNQS YGSLAKNLSY IRTFSSGILV 240
  241 PKSYIWPVDS ALYLQPHTSL VTDAHKEGLQ VFASEFANDF VIAYNYSYDP TAEYLSFIDN 300
  301 GNFSVDGFLS DFPVTPYRAI NCFSHVDPKR AKEQAKITII SKNGASGDFP GCTDLAYQRA 360
  361 ASDGADILDC NVQMSKDKIP FCMSSFDLIN STNVIETSFR NLSSVVSEIN PRRSGIYTFS 420
  421 LTMSKIQTLK PTISNLEKDS GLFRNPRNNK AGKFLTLSEF LFLPNRYSSL LGLLIEVENA 480
  481 AYLVEHQGIS VVDAVLDELK RATTQQNKTS ARTILIQSTD KSVLMKFKEK NKMNHDELVY 540
  541 RVDDNIRDVA DSAIKDIKNF AGSIVISKKS VFPYKGFIIL EKETNIASKL KSNGLRVYVE 600
  601 RFSNECVTHA FDFYDDPTLE IDSFVRDVQI DGIITDFPAT TARYRKNKCY GEFGLATTGE 660
  661 LITFANPMLL PPAEAPYPAL LDSDVTEPPL PEARSQPPAS SPSKAEEKAI EVPFAFIAMA 720
  721 ILVCFSISV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle